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MolNFT v1 · #170770 · protein

Structure of chromosomal passenger complex (cpc) bound to phosphorylated histone 3 peptide at 1.8 a.

6YIF: “Structure of chromosomal passenger complex (cpc) bound to phosphorylated histone 3 peptide at 1.8 a.”. X-ray diffraction, 2 ligands (ZN, SO4). MolNFT v1 #170770 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6YIF
Type
protein
Length
228 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O15392, Q53HL2, Q9NQS7
Ligands
ZN, SO4

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein130—O15392
B—protein56—Q53HL2
C—protein37—Q9NQS7
D—protein5——

Ligands and binding sites

  • ZN · Zinc ion · metal · chains A
  • SO4 · Sulfate ion · ion · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6YIF · Structure of Chromosomal Passenger Complex (CPC) bound to phosphorylated Histone 3… · the same entry in another collection · chain A against A, TM-score 1.00
  • O15392 · AlphaFold monomer V2.0 prediction for baculoviral iap repeat- containing protein 5… · a predicted model of the same protein · chain A against A, TM-score 0.96
  • Q53HL2 · AlphaFold monomer V2.0 prediction for borealin (Q53HL2) · a predicted model of the same protein · chain B against A, TM-score 0.90
  • Q9NQS7 · AlphaFold monomer V2.0 prediction for inner centromere protein (Q9NQS7) · a predicted model of the same protein · chain C against A, TM-score 0.71

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