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MolNFT v1 · #170614 · protein

Plasmodium falciparum myosin a delta-nter, post-rigor state

6YCZ: “Plasmodium falciparum myosin a delta-nter, post-rigor state”. X-ray diffraction, 3 ligands (ADP, MG, SO4). MolNFT v1 #170614 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6YCZ
Type
protein
Length
1,057 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8IDR3, W7K1J7, A0A2I0BQX1
Ligands
ADP, MG, SO4

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein795—Q8IDR3
B—protein131—W7K1J7
C—protein131—A0A2I0BQX1

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · chains A
  • MG · Magnesium ion · metal · chains A
  • SO4 · Sulfate ion · ion · 3 copies · chains A, B, C
  • EDO · 1,2-ethanediol · additive · 2 copies · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6YCZ · Plasmodium falciparum Myosin A delta-Nter, Post-Rigor state · the same entry in another collection · chain A against A, TM-score 1.00
  • Q8IDR3 · AlphaFold monomer V2.0 prediction for myosin-a (Q8IDR3) · a predicted model of the same protein · chain A against A, TM-score 0.91

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