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MolNFT v1 · #170592 · protein

Structure the ananain protease from ananas comosus covalently bound to the tlck inhibitor

6YCD: “Structure the ananain protease from ananas comosus covalently bound to the tlck inhibitor”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #170592 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6YCD
Type
protein
Length
432 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P80884
Ligands
SO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein216—P80884

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 3 copies · chains A, B
  • GOL · Glycerol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6YCD · Structure the ananain protease from Ananas comosus covalently bound to the TLCK inhibitor · the same entry in another collection · chain B against B, TM-score 1.00
  • P80884 · AlphaFold monomer V2.0 prediction for ananain (P80884) · a predicted model of the same protein · chain A against A, TM-score 0.99

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