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MolNFT v1 · #170577 · protein

Rt structure of thaumatin obtained at 1.14 a resolution from crystal grown in a mylar microchip.

6YBX · Thaumatin-1: “Rt structure of thaumatin obtained at 1.14 a resolution from crystal grown in a mylar microchip.”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #170577 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6YBX
Type
protein
Length
207 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Thaumatin-1
UniProt
P02883
Ligands
NA

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 39% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AThaumatin-1protein20712% helix, 39% strandP02883

Ligands and binding sites

  • NA · Sodium ion · metal · chains A
  • TLA · L(+)-tartaric acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

  • 6YBX · RT structure of Thaumatin obtained at 1.14 A resolution from crystal grown in a Mylar… · the same entry in another collection · chain A against A, TM-score 1.00

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