MolNFT v1 · #170565 · protein
Structure of mbp-mcl-1 in complex with compound 4D
6YBK: “Structure of mbp-mcl-1 in complex with compound 4D”. X-ray diffraction, 3 ligands (OK2, GLC, CL). MolNFT v1 #170565 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YBK
- Type
- protein
- Length
- 515 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0AEY0, Q07820
- Ligands
- OK2, GLC, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 515 | — | P0AEY0, Q07820 |
Ligands and binding sites
- OK2 · (2~{R})-2-[5-[3-chloranyl-2-methyl-4-[2-(4-methylpiperazin-1-yl)ethoxy]phenyl]-6-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4-yl]oxy-3-[2-(pyrazin-2-ylmethoxy)phenyl]propanoic acid · ligand · chains A
- GLC · alpha-D-glucopyranose · sugar · 2 copies · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YBK · Structure of MBP-Mcl-1 in complex with compound 4d · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AEY0
- Every structure of UniProt Q07820
- Elsewhere: RCSB PDB 6YBK · PDBe 6YBK · UniProt P0AEY0 · UniProt Q07820
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