MolNFT v1 · #170460 · protein
Igps (indole-3-glycerol phosphate synthase) from pseudomonas aeruginosa in complex with substrate inhibitor rcdrp
6Y88: “Igps (indole-3-glycerol phosphate synthase) from pseudomonas aeruginosa in complex with substrate inhibitor…”. X-ray diffraction, 2 ligands (137, PO4). MolNFT v1 #170460 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Y88
- Type
- protein
- Length
- 2,105 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A367MAM9
- Ligands
- 137, PO4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 264 | — | A0A367MAM9 |
| B, E, F | — | protein | 265 | — | A0A367MAM9 |
| C, H | — | protein | 264 | — | A0A367MAM9 |
| D | — | protein | 265 | — | A0A367MAM9 |
| G | — | protein | 253 | — | A0A367MAM9 |
Ligands and binding sites
- 137 · 1-(O-carboxy-phenylamino)-1-deoxy-D-ribulose-5-phosphate · ligand · 7 copies · chains A, B, C, D, E, F, H
- PO4 · Phosphate ion · ion · chains G
- GOL · Glycerol · additive · 7 copies · chains A, B, C, E, H
- CIT · Citric acid · additive · chains E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Y88 · IGPS (Indole-3-glycerol phosphate synthase) from Pseudomonas aeruginosa in complex with… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A367MAM9
- Elsewhere: RCSB PDB 6Y88 · PDBe 6Y88 · UniProt A0A367MAM9
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