MolNFT v1 · #170241 · protein

Crystal structure of an NCOR1BBD2-BCL6BTB chimera in complex with NEBULINSH3-NCOR1BBD1

6Y17: “Crystal structure of an NCOR1BBD2-BCL6BTB chimera in complex with NEBULINSH3-NCOR1BBD1”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #170241 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6Y17
Type: protein
Length: 417 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: O75376, P41182, H0Y786
Ligands: NA

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	129	—	O75376, P41182
B	—	protein	130	—	O75376, P41182
C	—	protein	76	—	O75376, H0Y786
D	—	protein	82	—	O75376, H0Y786

Ligands and binding sites

NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6Y17 · Crystal structure of an NCoR1BBD2-BCL6BTB chimera in complex with nebulinSH3-NCoR1BBD1 · the same entry in another collection · chain A against A, TM-score 1.00
O75376 · AlphaFold monomer V2.0 prediction for nuclear receptor corepressor 1 (O75376) · a predicted model of the same protein · chain D against A, TM-score 0.33
P41182 · AlphaFold monomer V2.0 prediction for B-cell lymphoma 6 protein (P41182) · a predicted model of the same protein · chain B against A, TM-score 0.32

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O75376
Every structure of UniProt P41182
Every structure of UniProt H0Y786
Elsewhere: RCSB PDB 6Y17 · PDBe 6Y17 · UniProt O75376 · UniProt P41182 · UniProt H0Y786

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