MolNFT v1 · #169970 · protein
X-ray structure of a monoclinic form of alpha amylase from aspergillus at 1.4 a resolution
6XSJ: “X-ray structure of a monoclinic form of alpha amylase from aspergillus at 1.4 a resolution”. X-ray diffraction, 4 ligands (NAG, MAN, CA). MolNFT v1 #169970 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XSJ
- Type
- protein
- Length
- 953 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B0FZ76
- Ligands
- NAG, MAN, CA, PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 476 | — | B0FZ76 |
| B | — | protein | 477 | — | B0FZ76 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains B, A
- MAN · alpha-D-mannopyranose · sugar · chains B
- CA · Calcium ion · metal · 2 copies · chains A, B
- PO4 · Phosphate ion · ion · 2 copies · chains B
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A, B
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A
- PG4 · Tetraethylene glycol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XSJ · X-ray structure of a monoclinic form of alpha amylase from Aspergillus at 1.4 A resolution · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0FZ76
- Elsewhere: RCSB PDB 6XSJ · PDBe 6XSJ · UniProt B0FZ76
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