MolNFT v1 · #169910 · protein
Structure of human D462-E4 TCR in complex with human MR1-5-op-ru
6XQP: “Structure of human D462-E4 TCR in complex with human MR1-5-op-ru”. X-ray diffraction, 4 ligands (2LJ, NA, CL). MolNFT v1 #169910 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XQP
- Type
- protein
- Length
- 1,576 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q95460, P61769
- Ligands
- 2LJ, NA, CL, BR
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 243 | — | Q95460 |
| B, D | — | protein | 100 | — | P61769 |
| C | — | protein | 254 | — | Q95460 |
| E | — | protein | 193 | — | — |
| F, H | — | protein | 246 | — | — |
| G | — | protein | 194 | — | — |
Ligands and binding sites
- 2LJ · 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol · ligand · 2 copies · chains A, C, H
- NA · Sodium ion · metal · chains D, F
- CL · Chloride ion · ion · 4 copies · chains F, A, H, C
- BR · Bromide ion · ion · 2 copies · chains E, G
- GOL · Glycerol · additive · 7 copies · chains A, F, C, E, H, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q95460
- Every structure of UniProt P61769
- Elsewhere: RCSB PDB 6XQP · PDBe 6XQP · UniProt Q95460 · UniProt P61769
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