MolNFT v1 · #169900 · protein

Crystal structure of sclam E144S mutant, a non-specific endo-beta-1, 3(4)-glucanase from family GH16, co-crystallized with 1,3-beta-D- cellotriosyl-glucose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site

6XQF · GH16 family protein: “Crystal structure of sclam E144S mutant, a non-specific endo-beta-1, 3(4)-glucanase from family GH16…”. X-ray diffraction, 3 ligands (BGC, GLC, CA), 1 pocket (best druggability 0.60). MolNFT v1 #169900 on…

PDB: 6XQF
Type: protein
Length: 258 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: GH16 family protein
EC: 3.2.1.39
UniProt: A0A0B5H9B3
Ligands: BGC, GLC, CA
Pockets: 1 · best druggability 0.60

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	GH16 family protein (EC 3.2.1.39)	protein	258	3% helix, 45% strand	A0A0B5H9B3

Ligands and binding sites

BGC · beta-D-glucopyranose · sugar · 2 copies · chains A
GLC · alpha-D-glucopyranose · sugar · chains A
CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	256	0.60	0.79	36	GLC, BGC

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

6XQF · Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0B5H9B3
Elsewhere: RCSB PDB 6XQF · PDBe 6XQF · UniProt A0A0B5H9B3

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