MolNFT v1 · #169830 · protein
Crystal structure of sclam, a non-specific endo-beta-1,3(4)-glucanase from family GH16
6XOF · GH16 family protein: “Crystal structure of sclam, a non-specific endo-beta-1,3(4)-glucanase from family GH16”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.64). MolNFT v1 #169830 on GenesisL1: 3D structure…
- PDB
- 6XOF
- Type
- protein
- Length
- 265 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- GH16 family protein
- EC
- 3.2.1.39
- UniProt
- A0A0B5H9B3
- Ligands
- CA
- Pockets
- 1 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | GH16 family protein (EC 3.2.1.39) | protein | 265 | 3% helix, 44% strand | A0A0B5H9B3 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 212 | 0.64 | 0.83 | 32 | GOL |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6XOF · Crystal structure of SCLam, a non-specific endo-beta-1,3(4)-glucanase from family GH16 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0B5H9B3
- Elsewhere: RCSB PDB 6XOF · PDBe 6XOF · UniProt A0A0B5H9B3
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