MolNFT v1 · #169735 · protein + DNA
Cryo-EM structure of ecmrr-DNA complex in ecmrr-rpitc-4NT
6XLK: “Cryo-EM structure of ecmrr-DNA complex in ecmrr-rpitc-4NT”. Electron microscopy, 2 ligands (1N7, 118). MolNFT v1 #169735 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XLK
- Type
- protein + DNA
- Length
- 582 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- 1N7, 118
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| N | — | dna | 23 | — | — |
| T | — | dna | 23 | — | — |
| G, H | — | protein | 268 | — | — |
Ligands and binding sites
- 1N7 · Chapso · ligand · 2 copies · chains G, H
- 118 · Tetraphenylantimonium ion · ligand · 2 copies · chains G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XLK · Cryo-EM structure of EcmrR-DNA complex in EcmrR-RPitc-4nt · the same entry in another collection · chain N against N, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6XLK · PDBe 6XLK
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