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Ligand · 118

118 · Tetraphenylantimonium ion

118, Tetraphenylantimonium ion (C24 H20 Sb +1, 430.2 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
118
Formula
C24 H20 Sb +1
Class
ligand
Structures
12
PDB entries
6

Binding sites

118 in 12 structures; the first of them:

  • 6XL5 · Cryo-EM structure of EcmrR-RNAP-promoter open complex (EcmrR-RPo) · 118 G302 · binds TYR127, ILE143, GLY147, ALA163, CYS165, PHE183, GLU185, TYR245 and 1 more
  • 6XL6 · Cryo-EM structure of EcmrR-DNA complex in EcmrR-RPo · 118 G302 · binds TYR127, ILE140, ILE143, PRO144, GLY147, LEU159, ALA163, CYS165 and 4 more
  • 6XL9 · Cryo-EM structure of EcmrR-RNAP-promoter initial transcribing complex with 3-nt RNA… · 118 F701 · binds THR432, TRP433, ARG436, GLN437, THR440, DT63, DT67, DA26 and 1 more
  • 6XLA · Cryo-EM structure of EcmrR-DNA complex in EcmrR-RPitc-3nt · 118 G301 · binds TYR127, ILE140, ILE143, GLY147, ALA163, CYS165, PHE183, GLU185 and 2 more
  • 6XLJ · Cryo-EM structure of EcmrR-RNAP-promoter initial transcribing complex with 4-nt RNA… · 118 C1402 · binds ARG540, GLU541, ARG542, ALA543, GLY544, PRO567, LEU788, ALA791 and 4 more
  • 6XLK · Cryo-EM structure of EcmrR-DNA complex in EcmrR-RPitc-4nt · 118 G302 · binds TYR127, ILE140, ILE143, PRO144, GLY147, LEU159, ALA163, CYS165 and 5 more
  • 6XL5 · Cryo-EM structure of ecmrr-rnap-promoter open complex (ecmrr-rpo) · 118 G302 · binds TYR127, ILE143, GLY147, PHE183, GLU185, TYR245, TRP250
  • 6XL6 · Cryo-EM structure of ecmrr-DNA complex in ecmrr-rpo · 118 G302 · binds TYR127, ILE143, GLY147, CYS165, PHE183, GLU185, TYR245, TRP250
  • 6XL9 · Cryo-EM structure of ecmrr-rnap-promoter initial transcribing complex with 3-nt RNA… · 118 F701 · binds THR432, TRP433, ARG436, GLN437, THR440, DT67, DA26
  • 6XLA · Cryo-EM structure of ecmrr-DNA complex in ecmrr-rpitc-3NT · 118 G301 · binds TYR127, ILE143, GLY147, CYS165, PHE183, GLU185, TYR245, TRP250
  • 6XLJ · Cryo-EM structure of ecmrr-rnap-promoter initial transcribing complex with 4-nt RNA… · 118 C1402 · binds ARG540, GLU541, ARG542, ALA543, GLY544, LEU788, ALA791, ASN792 and 2 more
  • 6XLK · Cryo-EM structure of ecmrr-DNA complex in ecmrr-rpitc-4NT · 118 G302 · binds TYR127, ILE140, ILE143, GLY147, CYS165, GLU185, TYR245, ILE249 and 1 more

Residues it binds most

TYR 24, ILE 23, GLY 26, TRP 26, CYS 22, GLU 22, PHE 20, ALA 16, PRO 10, ARG 4 (residue and the binding sites it lines).

Found with

  • 1N7 · Chapso
  • MG · Magnesium ion
  • ZN · Zinc ion

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