MolNFT v1 · #169653 · protein

Crystal structure of the helical cell shape determining protein PGP2 (K307A mutant) from campylobacter jejuni

6XJ7: “Crystal structure of the helical cell shape determining protein PGP2 (K307A mutant) from campylobacter jejuni”. X-ray diffraction, 7 pockets (best druggability 0.81). MolNFT v1 #169653 on GenesisL1: 3D structure, binding sites and…

PDB: 6XJ7
Type: protein
Length: 583 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: PGP2
UniProt: A0A0H3PAQ3
Pockets: 7 · best druggability 0.81

Structure

x-ray diffraction · 2 distinct chains · 23% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	PGP2	protein	293	23% helix, 32% strand	A0A0H3PAQ3
B	PGP2	protein	290	23% helix, 32% strand	A0A0H3PAQ3

Pockets

7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	814	0.81	0.83	68	empty
2	81	0.48	0.82	21	empty
3	55	0.41	0.82	19	empty
4	69	0.36	0.78	17	empty
5	52	0.32	0.77	21	empty

Interfaces

1 interface between chains.

A–B · 733 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

6XJ7 · Crystal structure of the helical cell shape determining protein Pgp2 (K307A mutant) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H3PAQ3
Elsewhere: RCSB PDB 6XJ7 · PDBe 6XJ7 · UniProt A0A0H3PAQ3

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