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Crystal structure of the helical cell shape determining protein PGP2 (K307A mutant) from campylobacter jejuni

Analyse Crystal structure of the helical cell shape determining protein PGP2 (K307A… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6XJ7
Type: protein
Length: 583 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: PGP2
UniProt: A0A0H3PAQ3
Pockets: 7 · best druggability 0.81

Structure

x-ray diffraction · 2 distinct chains · 23% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	PGP2	protein	293	23% helix, 32% strand	A0A0H3PAQ3
B	PGP2	protein	290	23% helix, 32% strand	A0A0H3PAQ3

Pockets

7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	814	0.81	0.83	68	empty
2	81	0.48	0.82	21	empty
3	55	0.41	0.82	19	empty
4	69	0.36	0.78	17	empty
5	52	0.32	0.77	21	empty

Interfaces

1 interface between chains.

A–B · 733 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

6XJ7 · Crystal structure of the helical cell shape determining protein Pgp2 (K307A mutant) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H3PAQ3
Elsewhere: RCSB PDB 6XJ7 · PDBe 6XJ7 · UniProt A0A0H3PAQ3

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