MolNFT v1 · #169604 · protein
Far-red absorbing dark state of JSC1_58120G3 with bound 18-1, 18-2 dihydrobiliverdin ixa (dhbv), the native chromophore precursor
6XHH: “Far-red absorbing dark state of JSC1_58120G3 with bound 18-1, 18-2 dihydrobiliverdin ixa (dhbv), the native…”. X-ray diffraction, 1 ligand (M1V). MolNFT v1 #169604 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XHH
- Type
- protein
- Length
- 359 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- M1V
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 179 | — | — |
| B | — | protein | 180 | — | — |
Ligands and binding sites
- M1V · mesobiliverdin IX(alpha) · ligand · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 8 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XHH · Far-red absorbing dark state of JSC1_58120g3 with bound 18-1, 18-2 dihydrobiliverdin IXa… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6XHH · PDBe 6XHH
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