MolNFT v1 · #169490 · protein
Crystal structure of mbp-TREM2 ig domain fusion with fragment, 2-((4- BROMOPHENYL)AMINO)ETHAN-1-ol
6XDS: “Crystal structure of mbp-TREM2 ig domain fusion with fragment, 2-((4- BROMOPHENYL)AMINO)ETHAN-1-ol”. X-ray diffraction, 2 ligands (V5S, GLC). MolNFT v1 #169490 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XDS
- Type
- protein
- Length
- 485 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0F8NYV9, Q9NZC2
- Ligands
- V5S, GLC
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 485 | — | A0A0F8NYV9, Q9NZC2 |
Ligands and binding sites
- V5S · 2-[(4-bromophenyl)amino]ethan-1-ol · ligand · chains A
- GLC · alpha-D-glucopyranose · sugar · 3 copies · chains A
- DMS · Dimethyl sulfoxide · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XDS · Crystal structure of MBP-TREM2 Ig domain fusion with fragment… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9NZC2 · AlphaFold monomer V2.0 prediction for triggering receptor expressed on myeloid cells 2… · a predicted model of the same protein · chain A against A, TM-score 0.25
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0F8NYV9
- Every structure of UniProt Q9NZC2
- Elsewhere: RCSB PDB 6XDS · PDBe 6XDS · UniProt A0A0F8NYV9 · UniProt Q9NZC2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.