MolNFT v1 · #169488 · protein
Crystal structure of phosphoserine aminotransferase (serc) from stenotrophomonas maltophilia K279A
6XDK: “Crystal structure of phosphoserine aminotransferase (serc) from stenotrophomonas maltophilia K279A”. X-ray diffraction, 3 ligands (PLP, CA, CL). MolNFT v1 #169488 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XDK
- Type
- protein
- Length
- 1,427 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B2FKF0
- Ligands
- PLP, CA, CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 358 | — | B2FKF0 |
| B, C | — | protein | 355 | — | B2FKF0 |
| D | — | protein | 359 | — | B2FKF0 |
Ligands and binding sites
- PLP · Pyridoxal-5'-phosphate · ligand · 2 copies · chains A, B, C, D
- CA · Calcium ion · metal · 2 copies · chains B, C
- CL · Chloride ion · ion · 2 copies · chains A, C, D
- EDO · 1,2-ethanediol · additive · 5 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XDK · Crystal structure of Phosphoserine aminotransferase (SerC) from Stenotrophomonas… · the same entry in another collection · chain A against A, TM-score 1.00
- B2FKF0 · AlphaFold monomer V2.0 prediction for phosphoserine aminotransferase (B2FKF0) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2FKF0
- Elsewhere: RCSB PDB 6XDK · PDBe 6XDK · UniProt B2FKF0
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