MolNFT v1 · #169190 · protein
Hsa siglec and unique domains in complex with 3'SIALYL-N- acetyllactosamine trisaccharide
6X3Q · Streptococcal hemagglutinin: “Hsa siglec and unique domains in complex with 3'SIALYL-N- acetyllactosamine trisaccharide”. X-ray diffraction, 4 ligands (NAG, GAL, SIA). MolNFT v1 #169190 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6X3Q
- Type
- protein
- Length
- 205 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Streptococcal hemagglutinin
- UniProt
- A8AWU7
- Ligands
- NAG, GAL, SIA, NA
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Streptococcal hemagglutinin | protein | 205 | 12% helix, 33% strand | A8AWU7 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
- GAL · beta-D-galactopyranose · sugar · chains A
- SIA · N-acetyl-alpha-neuraminic acid · sugar · chains A
- NA · Sodium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6X3Q · Hsa Siglec and Unique domains in complex with 3'sialyl-N-acetyllactosamine trisaccharide · the same entry in another collection · chain A against A, TM-score 1.00
- A8AWU7 · AlphaFold monomer V2.0 prediction for streptococcal hemagglutinin (A8AWU7) · a predicted model of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8AWU7
- Elsewhere: RCSB PDB 6X3Q · PDBe 6X3Q · UniProt A8AWU7
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