MolNFT v1 · #169128 · protein
WOR5 from pyrococcus furiosus, as crystallized
6X1O: “WOR5 from pyrococcus furiosus, as crystallized”. X-ray diffraction, 6 ligands (SF4, UKM, PTE). MolNFT v1 #169128 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6X1O
- Type
- protein
- Length
- 1,579 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- I6V2C3, I6U881
- Ligands
- SF4, UKM, PTE, MG, PO4, CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 623 | — | I6V2C3 |
| B, D | — | protein | 166 | — | I6U881 |
| C | — | protein | 624 | — | I6V2C3 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · 10 copies · chains A, B, C, D
- UKM · (1R)-1-hydroxybutane-1-sulfonic acid · ligand · 2 copies · chains A, C
- PTE · Tungstopterin cofactor · ligand · 2 copies · chains A, C
- MG · Magnesium ion · metal · 4 copies · chains A, C
- PO4 · Phosphate ion · ion · 2 copies · chains A, B, D, C
- CL · Chloride ion · ion · 2 copies · chains B, C, A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6X1O · WOR5 from Pyrococcus furiosus, as crystallized · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I6V2C3
- Every structure of UniProt I6U881
- Elsewhere: RCSB PDB 6X1O · PDBe 6X1O · UniProt I6V2C3 · UniProt I6U881
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