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MolNFT v1 · #169064 · protein

LY3041658 Fab bound to CXCL8

6WZM: “LY3041658 Fab bound to CXCL8”. X-ray diffraction. MolNFT v1 #169064 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6WZM
Type
protein
Length
1,001 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P10145

Structure

x-ray diffraction · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein222——
B, D—protein213——
C—protein224——
E—protein64—P10145
F—protein65—P10145

Ligands and binding sites

  • EDO · 1,2-ethanediol · additive · chains B
  • PG4 · Tetraethylene glycol · additive · chains C, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6WZM · LY3041658 Fab bound to CXCL8 · the same entry in another collection · chain F against F, TM-score 1.00
  • P10145 · AlphaFold monomer V2.0 prediction for interleukin-8 (P10145) · a predicted model of the same protein · chain E against A, TM-score 0.88

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