MolNFT v1 · #169036 · protein
Crystal structure of danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant complexed with saha-bpyne
6WYP: “Crystal structure of danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant complexed with…”. X-ray diffraction, 3 ligands (UFS, K, ZN). MolNFT v1 #169036 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6WYP
- Type
- protein
- Length
- 358 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- F8W4B7
- Ligands
- UFS, K, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 358 | — | F8W4B7 |
Ligands and binding sites
- UFS · N~1~-(4-{4-[(hex-5-ynoyl)amino]benzene-1-carbonyl}phenyl)-N~8~-hydroxyoctanediamide · ligand · chains A
- K · Potassium ion · metal · 2 copies · chains A
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WYP · Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F8W4B7
- Elsewhere: RCSB PDB 6WYP · PDBe 6WYP · UniProt F8W4B7
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