MolNFT v1 · #169035 · protein
Crystal structure of danio rerio histone deacetylase 6 catalytic domain 1 (CD1) H82F F202Y double mutant complexed with trichostatin a
6WYO: “Crystal structure of danio rerio histone deacetylase 6 catalytic domain 1 (CD1) H82F F202Y double mutant…”. X-ray diffraction, 3 ligands (TSN, K, ZN). MolNFT v1 #169035 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WYO
- Type
- protein
- Length
- 704 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- F8W4B7
- Ligands
- TSN, K, ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 347 | — | F8W4B7 |
| B | — | protein | 357 | — | F8W4B7 |
Ligands and binding sites
- TSN · Trichostatin A · ligand · 2 copies · chains A, B
- K · Potassium ion · metal · 4 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WYO · Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) H82F… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F8W4B7
- Elsewhere: RCSB PDB 6WYO · PDBe 6WYO · UniProt F8W4B7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.