MolNFT v1 · #169002 · protein
De novo tim barrel-ferredoxin fold fusion homodimer with 4-glutamate centre tfd-ee
6WXP: “De novo tim barrel-ferredoxin fold fusion homodimer with 4-glutamate centre tfd-ee”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #169002 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WXP
- Type
- protein
- Length
- 931 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CA
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 167 | — | — |
| B | — | protein | 165 | — | — |
| C | — | protein | 154 | — | — |
| D | — | protein | 160 | — | — |
| E | — | protein | 141 | — | — |
| F | — | protein | 144 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 3 copies · chains A, B, C, D, E, F
- EDO · 1,2-ethanediol · additive · 12 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WXP · De novo TIM barrel-ferredoxin fold fusion homodimer with 4-glutamate centre TFD-EE · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6WXP · PDBe 6WXP
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