MolNFT v1 · #168979 · protein
Crystal structure of truncated bacteriophage hyaluronan lyase hylp in complex with unsaturated hyaluronan tetra-saccharides
6WWX: “Crystal structure of truncated bacteriophage hyaluronan lyase hylp in complex with unsaturated hyaluronan…”. X-ray diffraction, 4 ligands (GCD, NAG, BDP). MolNFT v1 #168979 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6WWX
- Type
- protein
- Length
- 816 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P15316
- Ligands
- GCD, NAG, BDP, NI
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 273 | — | P15316 |
| B | — | protein | 271 | — | P15316 |
| C | — | protein | 272 | — | P15316 |
Ligands and binding sites
- GCD · 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid · ligand · 6 copies · chains A, B, C
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 12 copies · chains A, B, C
- BDP · beta-D-glucopyranuronic acid · sugar · 6 copies · chains B, C, A
- NI · Nickel (II) ion · metal · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WWX · Crystal structure of truncated bacteriophage hyaluronan lyase HylP in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15316
- Elsewhere: RCSB PDB 6WWX · PDBe 6WWX · UniProt P15316
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