MolNFT v1 · #168944 · protein
Crystal structure of the R59P-SNAP25 containing snare complex
6WVW: “Crystal structure of the R59P-SNAP25 containing snare complex”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #168944 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WVW
- Type
- protein
- Length
- 529 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P63045, P32851, P60881
- Ligands
- CA
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 62 | — | P63045 |
| B, F | — | protein | 66 | — | P32851 |
| C | — | protein | 73 | — | P60881 |
| D | — | protein | 63 | — | P60881 |
| E | — | protein | 63 | — | P63045 |
| G | — | protein | 74 | — | P60881 |
| H | — | protein | 62 | — | P60881 |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains B, C, D, E, F
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains C, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WVW · Crystal structure of the R59P-SNAP25 containing SNARE complex · the same entry in another collection · chain H against H, TM-score 1.00
- P32851 · AlphaFold monomer V2.0 prediction for syntaxin-1A (P32851) · a predicted model of the same protein · chain B against A, TM-score 0.80
- P63045 · AlphaFold monomer V2.0 prediction for vesicle-associated membrane protein 2 (P63045) · a predicted model of the same protein · chain E against A, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63045
- Every structure of UniProt P32851
- Every structure of UniProt P60881
- Elsewhere: RCSB PDB 6WVW · PDBe 6WVW · UniProt P63045 · UniProt P32851 · UniProt P60881
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