MolNFT v1 · #168751 · protein
Crystal structure of NSP16-NSP10 heterodimer from SARS-cov-2 in complex with 7-methyl-gpppa and S-adenosyl-L-homocysteine.
6WQ3: “Crystal structure of NSP16-NSP10 heterodimer from SARS-cov-2 in complex with 7-methyl-gpppa and…”. X-ray diffraction, 4 ligands (GTA, 8NK, ZN). MolNFT v1 #168751 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WQ3
- Type
- protein
- Length
- 419 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- GTA, 8NK, ZN, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 300 | — | P0DTD1 |
| B | — | protein | 119 | — | P0DTD1 |
Ligands and binding sites
- GTA · P1-7-methylguanosine-P3-adenosine-5',5'-triphosphate · ligand · chains A
- 8NK · 7-methylguanosine 5'-diphosphate · ligand · chains A
- ZN · Zinc ion · metal · 2 copies · chains B
- SO4 · Sulfate ion · ion · 8 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WQ3 · Crystal Structure of Nsp16-Nsp10 Heterodimer from SARS-CoV-2 in Complex with… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 6WQ3 · PDBe 6WQ3 · UniProt P0DTD1
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