MolNFT v1 · #168742 · protein
Structure of S-allyl-L-cysteine S-oxygenase from allium sativum
6WPU · Flavin-containing monooxygenase: “Structure of S-allyl-L-cysteine S-oxygenase from allium sativum”. X-ray diffraction, 2 ligands (FAD, SO4), 4 pockets (best druggability 0.85). MolNFT v1 #168742 on GenesisL1: 3D structure, binding…
- PDB
- 6WPU
- Type
- protein
- Length
- 439 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavin-containing monooxygenase
- EC
- 1.-.-.-
- UniProt
- A0A0M4U3V7
- Ligands
- FAD, SO4
- Pockets
- 4 · best druggability 0.85
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavin-containing monooxygenase (EC 1.-.-.-) | protein | 439 | 30% helix, 22% strand | A0A0M4U3V7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1154 | 0.85 | 0.86 | 94 | FAD |
| 2 | 90 | 0.43 | 0.79 | 19 | empty |
| 3 | 61 | 0.34 | 0.77 | 16 | SO4 |
| 4 | 69 | 0.29 | 0.73 | 15 | empty |
Compared structures
- 6WPU · Structure of S-allyl-L-cysteine S-oxygenase from Allium sativum · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0M4U3V7
- Elsewhere: RCSB PDB 6WPU · PDBe 6WPU · UniProt A0A0M4U3V7
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