MolNFT v1 · #168697 · protein
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-methylenebisphosphonate inositol pentakisphosphate (5- pcp-IP5)
6WOG: “Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-methylenebisphosphonate…”. X-ray diffraction, 2 ligands (5A3, SO4). MolNFT v1 #168697 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WOG
- Type
- protein
- Length
- 134 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O95989
- Ligands
- 5A3, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 134 | — | O95989 |
Ligands and binding sites
- 5A3 · Methylenebisphosphonate inositol pentakisphosphate · ligand · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WOG · Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- O95989 · AlphaFold monomer V2.0 prediction for diphosphoinositol polyphosphate phosphohydrolase 1… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O95989
- Elsewhere: RCSB PDB 6WOG · PDBe 6WOG · UniProt O95989
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