MolNFT v1 · #168607 · RNA

Tetrahymena ribozyme models, 6.8 ångström resolution

6WLS · RNA (388-mer): “Tetrahymena ribozyme models, 6.8 ångström resolution”. Electron microscopy, 15 pockets (best druggability 0.76). MolNFT v1 #168607 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6WLS
Type: RNA
Length: 388 nucleotides
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA (388-mer)
Pockets: 15 · best druggability 0.76

Structure

electron microscopy · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA (388-mer)	rna	388	—	—

Pockets

15 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1151	0.76	0.79	54	empty
2	87	0.67	0.93	12	empty
3	715	0.64	0.75	36	empty
4	315	0.61	0.79	20	empty
5	504	0.59	0.75	29	empty

Compared structures

6WLS · Tetrahymena ribozyme models, 6.8 Angstrom resolution · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6WLS · PDBe 6WLS

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