MolNFT v1 · #168601 · RNA

F. nucleatum glycine riboswitch with glycine models, 7.4 ångström resolution

6WLM · RNA (171-mer): “F. nucleatum glycine riboswitch with glycine models, 7.4 ångström resolution”. Electron microscopy, 9 pockets (best druggability 0.69). MolNFT v1 #168601 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6WLM
Type: RNA
Length: 171 nucleotides
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA (171-mer)
Pockets: 9 · best druggability 0.69

Structure

electron microscopy · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA (171-mer)	rna	171	—	—

Pockets

9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	720	0.69	0.78	45	empty
2	324	0.55	0.76	19	empty
3	71	0.51	0.87	13	empty
4	63	0.43	0.83	14	empty
5	236	0.43	0.72	21	empty

Compared structures

6WLM · F. nucleatum glycine riboswitch with glycine models, 7.4 Angstrom resolution · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6WLM · PDBe 6WLM

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