MolNFT v1 · #168577 · protein
Crystal structure of RNA-binding domain of nucleocapsid phosphoprotein from SARS cov-2, monoclinic crystal form
6WKP: “Crystal structure of RNA-binding domain of nucleocapsid phosphoprotein from SARS cov-2, monoclinic crystal…”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #168577 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WKP
- Type
- protein
- Length
- 455 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC9
- Ligands
- ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 103 | — | P0DTC9 |
| B | — | protein | 117 | — | P0DTC9 |
| C | — | protein | 120 | — | P0DTC9 |
| D | — | protein | 115 | — | P0DTC9 |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains A, D, B, C
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · 2 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WKP · Crystal structure of RNA-binding domain of nucleocapsid phosphoprotein from SARS CoV-2… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC9
- Elsewhere: RCSB PDB 6WKP · PDBe 6WKP · UniProt P0DTC9
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