MolNFT v1 · #168526 · protein

The structure of NTMT1 in complex with compound C2A

6WJ7: “The structure of NTMT1 in complex with compound C2A”. X-ray diffraction, 2 ligands (AN6, NH2). MolNFT v1 #168526 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6WJ7
Type: protein
Length: 225 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9BV86
Ligands: AN6, NH2

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	—	protein	219	—	Q9BV86
A	—	protein	6	—	—

Ligands and binding sites

AN6 · 5'-{[(3S)-3-amino-3-carboxypropyl](ethyl)amino}-5'-deoxyadenosine · ligand · chains B, A
NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6WJ7 · The structure of NTMT1 in complex with compound C2A · the same entry in another collection · chain A against A, TM-score 1.00
Q9BV86 · AlphaFold monomer V2.0 prediction for N-terminal xaa-pro-lys N-methyltransferase 1… · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9BV86
Elsewhere: RCSB PDB 6WJ7 · PDBe 6WJ7 · UniProt Q9BV86

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