MolNFT v1 · #168224 · protein
Crystal structure of human CDK9/CYCLINT1 in complex with MC180295
6W9E: “Crystal structure of human CDK9/CYCLINT1 in complex with MC180295”. X-ray diffraction, 3 ligands (TO7, TOJ, PO4). MolNFT v1 #168224 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6W9E
- Type
- protein
- Length
- 563 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P50750, O60563
- Ligands
- TO7, TOJ, PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 311 | — | P50750 |
| B | — | protein | 252 | — | O60563 |
Ligands and binding sites
- TO7 · (4-amino-2-{[(1S,2S,4R)-bicyclo[2.2.1]heptan-2-yl]amino}-1,3-thiazol-5-yl)(2-nitrophenyl)methanone · ligand · 2 copies · chains A
- TOJ · (4-amino-2-{[(1R,2R,4S)-bicyclo[2.2.1]heptan-2-yl]amino}-1,3-thiazol-5-yl)(2-nitrophenyl)methanone · ligand · 2 copies · chains A
- PO4 · Phosphate ion · ion · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6W9E · Crystal Structure of Human CDK9/cyclinT1 in complex with MC180295 · the same entry in another collection · chain A against A, TM-score 1.00
- O60563 · AlphaFold monomer V2.0 prediction for cyclin-T1 (O60563) · a predicted model of the same protein · chain B against A, TM-score 0.98
- P50750 · AlphaFold monomer V2.0 prediction for cyclin-dependent kinase 9 (P50750) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P50750
- Every structure of UniProt O60563
- Elsewhere: RCSB PDB 6W9E · PDBe 6W9E · UniProt P50750 · UniProt O60563
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