MolNFT v1 · #168159 · protein + DNA
The crystal structure of the 2009/H1N1/CALIFORNIA pa endonuclease mutant E119D bound to DNA oligomer tagcat (uncleaved, 5MM overnight DNA soak)
6W7A: “The crystal structure of the 2009/H1N1/CALIFORNIA pa endonuclease mutant E119D bound to DNA oligomer tagcat…”. X-ray diffraction, 2 ligands (MN, SO4). MolNFT v1 #168159 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6W7A
- Type
- protein + DNA
- Length
- 184 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A4P2TE19, C6H0Y9
- Ligands
- MN, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 178 | — | A0A4P2TE19, C6H0Y9 |
| B | — | dna | 6 | — | — |
Ligands and binding sites
- MN · Manganese (II) ion · metal · chains A, B
- SO4 · Sulfate ion · ion · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6W7A · The crystal structure of the 2009/H1N1/California PA endonuclease mutant E119D bound to… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4P2TE19
- Every structure of UniProt C6H0Y9
- Elsewhere: RCSB PDB 6W7A · PDBe 6W7A · UniProt A0A4P2TE19 · UniProt C6H0Y9
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