MolNFT v1 · #168073 · protein
Crystal structure of the adcc-potent, weakly neutralizing HIV env co- receptor binding site antibody N12-I2 Fab in complex with HIV-1 clade A/E GP120 and M48U1
6W4M: “Crystal structure of the adcc-potent, weakly neutralizing HIV env co- receptor binding site antibody N12-I2…”. X-ray diffraction, 3 ligands (MPT, NAG, NH2). MolNFT v1 #168073 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6W4M
- Type
- protein
- Length
- 803 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0M3KKW9
- Ligands
- MPT, NAG, NH2
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| G | — | protein | 338 | — | A0A0M3KKW9 |
| L | — | protein | 213 | — | — |
| H | — | protein | 226 | — | — |
| N | — | protein | 26 | — | — |
Ligands and binding sites
- MPT · Beta-mercaptopropionic acid · ligand · chains G, N
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 9 copies · chains G
- NH2 · Amino group · ion · chains N
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6W4M · Crystal structure of the adcc-potent, weakly neutralizing HIV env co-receptor binding… · the same entry in another collection · chain G against G, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0M3KKW9
- Elsewhere: RCSB PDB 6W4M · PDBe 6W4M · UniProt A0A0M3KKW9
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