MolNFT v1 · #167684 · protein
Sialic acid binding region of streptococcus sanguinis SK1 adhesin
6VS7: “Sialic acid binding region of streptococcus sanguinis SK1 adhesin”. X-ray diffraction, 3 ligands (CA, MG, SO4). MolNFT v1 #167684 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VS7
- Type
- protein
- Length
- 818 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CA, MG, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 409 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 8 copies · chains A, E
- MG · Magnesium ion · metal · 2 copies
- SO4 · Sulfate ion · ion · 4 copies · chains A
- EDO · 1,2-ethanediol · additive · 10 copies · chains A, E
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, E
- GOL · Glycerol · additive · chains E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VS7 · Sialic acid binding region of Streptococcus Sanguinis SK1 adhesin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6VS7 · PDBe 6VS7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.