MolNFT v1 · #167626 · protein
Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 3 (from focused refinement)
6VQK: “Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 3 (from focused refinement)”. Electron microscopy. MolNFT v1 #167626 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VQK
- Type
- protein
- Length
- 1,060 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5FVI6, Q6PCU2, Q8R2H0, P25286
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| G | — | protein | 360 | — | Q5FVI6 |
| I, K | — | protein | 64 | — | Q6PCU2 |
| J | — | protein | 63 | — | Q6PCU2 |
| M, N | — | protein | 67 | — | Q8R2H0 |
| O | — | protein | 66 | — | Q8R2H0 |
| a | — | protein | 309 | — | P25286 |
Compared structures
- 6VQK · Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 3 (from… · the same entry in another collection · chain a against a, TM-score 1.00
- Q5FVI6 · AlphaFold monomer V2.0 prediction for V-type proton ATPase subunit C 1 (Q5FVI6) · a predicted model of the same protein · chain G against A, TM-score 0.94
- P25286 · AlphaFold monomer V2.0 prediction for V-type proton ATPase 116 kda subunit A1 (P25286) · a predicted model of the same protein · chain a against A, TM-score 0.88
- Q6PCU2 · AlphaFold monomer V2.0 prediction for V-type proton ATPase subunit E 1 (Q6PCU2) · a predicted model of the same protein · chain J against A, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5FVI6
- Every structure of UniProt Q6PCU2
- Every structure of UniProt Q8R2H0
- Every structure of UniProt P25286
- Elsewhere: RCSB PDB 6VQK · PDBe 6VQK · UniProt Q5FVI6 · UniProt Q6PCU2 · UniProt Q8R2H0 · UniProt P25286
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