MolNFT v1 · #167590 · protein
Estrogen receptor alpha ligand binding domain in complex with the selective estrogen receptor modulator clomiphene
6VPF: “Estrogen receptor alpha ligand binding domain in complex with the selective estrogen receptor modulator…”. X-ray diffraction, 1 ligand (53Q). MolNFT v1 #167590 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VPF
- Type
- protein
- Length
- 952 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P03372
- Ligands
- 53Q
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 243 | — | P03372 |
| A | — | protein | 236 | — | P03372 |
| C | — | protein | 237 | — | P03372 |
| D | — | protein | 236 | — | P03372 |
Ligands and binding sites
- 53Q · Clomifene · ligand · 4 copies · chains B, A, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VPF · Estrogen Receptor Alpha Ligand Binding Domain in Complex with the Selective Estrogen… · the same entry in another collection · chain D against D, TM-score 1.00
- P03372 · AlphaFold monomer V2.0 prediction for estrogen receptor (P03372) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03372
- Elsewhere: RCSB PDB 6VPF · PDBe 6VPF · UniProt P03372
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