MolNFT v1 · #167490 · protein
T4H2 T cell receptor bound to HLA-A2 presenting GP100T2L peptide (ildqvpfsv)
6VMC: “T4H2 T cell receptor bound to HLA-A2 presenting GP100T2L peptide (ildqvpfsv)”. X-ray diffraction. MolNFT v1 #167490 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VMC
- Type
- protein
- Length
- 825 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A5B8RNS7, P61769, P40967
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | — | protein | 201 | — | — |
| E | — | protein | 240 | — | — |
| A | — | protein | 275 | — | A0A5B8RNS7 |
| B | — | protein | 100 | — | P61769 |
| C | — | protein | 9 | — | P40967 |
Ligands and binding sites
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VMC · T4H2 T cell receptor bound to HLA-A2 presenting gp100T2L peptide (ILDQVPFSV) · the same entry in another collection · chain E against E, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98
- P40967 · AlphaFold monomer V2.0 prediction for melanocyte protein pmel (P40967) · a predicted model of the same protein · chain C against A, TM-score 0.44
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A5B8RNS7
- Every structure of UniProt P61769
- Every structure of UniProt P40967
- Elsewhere: RCSB PDB 6VMC · PDBe 6VMC · UniProt A0A5B8RNS7 · UniProt P61769 · UniProt P40967
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.