MolNFT v1 · #167435 · protein
Crystal structure of human parp-1 cat domain bound to inhibitor UKTT15
6VKO: “Crystal structure of human parp-1 cat domain bound to inhibitor UKTT15”. X-ray diffraction, 2 ligands (L1S, SO4). MolNFT v1 #167435 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VKO
- Type
- protein
- Length
- 1,360 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P09874
- Ligands
- L1S, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 340 | — | P09874 |
Ligands and binding sites
- L1S · Methyl 2-{4-[4-(7-carbamoyl-1H-benzimidazol-2-yl) benzene-1-carbonyl]piperazin-1-yl}pyrimidine-5-carboxylate · ligand · 4 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · 12 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VKO · Crystal Structure of human PARP-1 CAT domain bound to inhibitor UKTT15 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09874
- Elsewhere: RCSB PDB 6VKO · PDBe 6VKO · UniProt P09874
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