MolNFT v1 · #167155 · protein
TB38 complex
6VCA: “TB38 complex”. X-ray diffraction, 2 ligands (NAG, BMA). MolNFT v1 #167155 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VCA
- Type
- protein
- Length
- 3,616 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q53Z63
- Ligands
- NAG, BMA
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 523 | — | Q53Z63 |
| H, K | — | protein | 220 | — | — |
| L, F, J | — | protein | 212 | — | — |
| E | — | protein | 219 | — | — |
| P | — | protein | 119 | — | — |
| O | — | protein | 110 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A, B, D
- BMA · beta-D-mannopyranose · sugar
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VCA · TB38 complex · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q53Z63
- Elsewhere: RCSB PDB 6VCA · PDBe 6VCA · UniProt Q53Z63
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