MolNFT v1 · #167148 · protein
Peanut lectin complexed with S-beta-D-thiogalactopyranosyl 6-deoxy-6- S-propynyl-beta-D-glucopyranoside (stg)
6VC3: “Peanut lectin complexed with S-beta-D-thiogalactopyranosyl 6-deoxy-6- S-propynyl-beta-D-glucopyranoside (stg)”. X-ray diffraction, 3 ligands (QWJ, MN, CA). MolNFT v1 #167148 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6VC3
- Type
- protein
- Length
- 928 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P02872
- Ligands
- QWJ, MN, CA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 232 | — | P02872 |
Ligands and binding sites
- QWJ · 6-S-(prop-2-yn-1-yl)-6-thio-beta-D-glucopyranosyl 1-thio-beta-D-galactopyranoside · ligand · 3 copies · chains A, B, D
- MN · Manganese (II) ion · metal · 4 copies · chains A, B, C, D
- CA · Calcium ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02872
- Elsewhere: RCSB PDB 6VC3 · PDBe 6VC3 · UniProt P02872
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