MolNFT v1 · #167136 · protein
The crystal structure of the 2009 H1N1/CALIFORNIA pa endonuclease wild type in complex with SJ000988248
6VBR: “The crystal structure of the 2009 H1N1/CALIFORNIA pa endonuclease wild type in complex with SJ000988248”. X-ray diffraction, 4 ligands (QQ4, QVV, MN). MolNFT v1 #167136 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VBR
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C6H0Y9
- Ligands
- QQ4, QVV, MN, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 179 | — | C6H0Y9 |
Ligands and binding sites
- QQ4 · Hexa Vinylpyrrolidone K15 · ligand
- QVV · Benzyl [2-(4-{[2-(6-amino-9H-purin-9-yl) ethyl]carbamoyl}-5-hydroxy-6-oxo-1,6-dihydropyrimidin-2-yl)propan-2-yl]carbamate · ligand · chains A
- MN · Manganese (II) ion · metal · 2 copies · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VBR · The crystal structure of the 2009 H1N1/California PA endonuclease wild type in complex… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6H0Y9
- Elsewhere: RCSB PDB 6VBR · PDBe 6VBR · UniProt C6H0Y9
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