MolNFT v1 · #167033 · protein

Structure of an inner membrane protein required for phopq regulated increases in outer membrane cardiolipin

6V8Q: “Structure of an inner membrane protein required for phopq regulated increases in outer membrane cardiolipin”. X-ray diffraction, 3 ligands (QSR, CA, PO4). MolNFT v1 #167033 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 6V8Q
Type: protein
Length: 1,134 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P40709
Ligands: QSR, CA, PO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	569	—	P40709
B	—	protein	565	—	P40709

Ligands and binding sites

QSR · (9Z,21R,24R,30R,33R,44Z)-24,27,30-trihydroxy-18,24,30, 36-tetraoxo-19,23,25,29,31,35-hexaoxa-24lambda~5~, 30lambda~5~-diphosphatripentaconta-9,44-diene-21,33-diyl (9z,9'z)di-octadec-9-enoate · ligand · 4 copies · chains A, B
CA · Calcium ion · metal · chains A
PO4 · Phosphate ion · ion · 2 copies · chains A, B
LMT · Dodecyl-beta-D-maltoside · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6V8Q · Structure of an inner membrane protein required for PhoPQ regulated increases in outer… · the same entry in another collection · chain A against A, TM-score 1.00
P40709 · AlphaFold monomer V2.0 prediction for inner membrane protein yejm (P40709) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P40709
Elsewhere: RCSB PDB 6V8Q · PDBe 6V8Q · UniProt P40709

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