MolNFT v1 · #166999 · protein

Crystal structure of K37-acetylated SUMO1 in complex with pias-SIM2

6V7R · Small ubiquitin-related modifier 1: “Crystal structure of K37-acetylated SUMO1 in complex with pias-SIM2”. X-ray diffraction. MolNFT v1 #166999 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6V7R
Type: protein
Length: 169 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Small ubiquitin-related modifier 1; Protein pias
UniProt: P63165

Structure

x-ray diffraction · 4 distinct chains · 21% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
C	Small ubiquitin-related modifier 1	protein	74	24% helix, 36% strand	P63165
D	Protein pias	protein	10	0% helix, 30% strand	—
A	Small ubiquitin-related modifier 1	protein	77	23% helix, 36% strand	P63165
B	Protein pias	protein	8	0% helix, 38% strand	—

Interfaces

3 interfaces between chains.

A–B · 497 Å² buried · 8 hydrogen bonds · protein-protein
C–A · 454 Å² buried · 10 hydrogen bonds · protein-protein
C–D · 439 Å² buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (acetylation).

Compared structures

6V7R · Crystal structure of K37-acetylated SUMO1 in complex with PIAS-SIM2 · the same entry in another collection · chain C against C, TM-score 1.00
P63165 · AlphaFold monomer V2.0 prediction for small ubiquitin-related modifier 1 (P63165) · a predicted model of the same protein · chain C against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P63165
Elsewhere: RCSB PDB 6V7R · PDBe 6V7R · UniProt P63165

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