MolNFT v1 · #166870 · protein

Crystal structure of CDYL2 in complex with H3K27ME3

6V3N: “Crystal structure of CDYL2 in complex with H3K27ME3”. X-ray diffraction, 2 ligands (UNX, NH2). MolNFT v1 #166870 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6V3N
Type: protein
Length: 149 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8N8U2
Ligands: UNX, NH2

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	60	—	Q8N8U2
B	—	protein	62	—	Q8N8U2
C	—	protein	14	—	—
D	—	protein	13	—	—

Ligands and binding sites

UNX · Unknown atom or ion · ion · 12 copies · chains A, C, B
NH2 · Amino group · ion · 2 copies · chains A, C, B, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6V3N · Crystal structure of CDYL2 in complex with H3K27me3 · the same entry in another collection · chain A against A, TM-score 1.00
Q8N8U2 · AlphaFold monomer V2.0 prediction for chromodomain Y-like protein 2 (Q8N8U2) · a predicted model of the same protein · chain A against A, TM-score 0.67

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8N8U2
Elsewhere: RCSB PDB 6V3N · PDBe 6V3N · UniProt Q8N8U2

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.