MolNFT v1 · #166803 · protein
Crystal structure of the bromodomain of human BRD9 bound to I-BRD9
6V1B: “Crystal structure of the bromodomain of human BRD9 bound to I-BRD9”. X-ray diffraction, 1 ligand (H1B). MolNFT v1 #166803 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6V1B
- Type
- protein
- Length
- 227 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9H8M2
- Ligands
- H1B
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 114 | — | Q9H8M2 |
| B | — | protein | 113 | — | Q9H8M2 |
Ligands and binding sites
- H1B · N'-[1,1-bis(oxidanylidene)thian-4-yl]-5-ethyl-4-oxidanylidene-7-[3-(trifluoromethyl)phenyl]thieno[3,2-c]pyridine-2-carboximidamide · ligand · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6V1B · Crystal structure of the bromodomain of human BRD9 bound to I-BRD9 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9H8M2 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 9 (Q9H8M2) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H8M2
- Elsewhere: RCSB PDB 6V1B · PDBe 6V1B · UniProt Q9H8M2
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