MolNFT v1 · #166792 · protein

Immune receptor complex

6V0Y: “Immune receptor complex”. X-ray diffraction, 2 ligands (CIR, NAG). MolNFT v1 #166792 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6V0Y
Type: protein
Length: 812 residues
Chains: 5
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P01903, P13760
Ligands: CIR, NAG

Structure

x-ray diffraction · 5 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	175	—	P01903
B	—	protein	179	—	P13760
C	—	protein	11	—	—
D	—	protein	205	—	—
E	—	protein	242	—	—

Ligands and binding sites

CIR · Citrulline · ligand · 2 copies · chains B, C, D, E, A
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A, B
GOL · Glycerol · additive · 4 copies · chains B, D, E

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6V0Y · immune receptor complex · the same entry in another collection · chain A against A, TM-score 1.00
P01903 · AlphaFold monomer V2.0 prediction for HLA class II histocompatibility antigen, dr alpha… · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P01903
Every structure of UniProt P13760
Elsewhere: RCSB PDB 6V0Y · PDBe 6V0Y · UniProt P01903 · UniProt P13760

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