MolNFT v1 · #166261 · protein
Crystal structure of a DIB2-split protein
6UKL: “Crystal structure of a DIB2-split protein”. X-ray diffraction, 2 ligands (HEM, SO4). MolNFT v1 #166261 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UKL
- Type
- protein
- Length
- 457 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0A902
- Ligands
- HEM, SO4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 87 | — | P0A902 |
| C | — | protein | 86 | — | P0A902 |
| D | — | protein | 68 | — | P0A902 |
| F | — | protein | 66 | — | P0A902 |
| B | — | protein | 63 | — | P0A902 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · chains E, D, F
- SO4 · Sulfate ion · ion · 15 copies · chains A, B, C, D, E
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · 2 copies · chains C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- P0A902 · AlphaFold monomer V2.0 prediction for outer membrane lipoprotein blc (P0A902) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A902
- Elsewhere: RCSB PDB 6UKL · PDBe 6UKL · UniProt P0A902
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